Fundamentally this may have a lot to do with the 2.49K and 249K resistor swap. You could try replacing the 431 regulator there, and that might work, but you may also just have an iffy joint or a lifted trace on one end of the 2.49K resistor on that side of the board. I would probably pop in a new regulator and add a little heat and solder to the 2.49K resistor.