The voltage is a bit low because the JJ does not meet the WE 300B specification of 1.2 amps filament draw - the spec sheet says 1.3 amps, and the drop on the 0.62 ohm resistor agrees (1.27 amps). This is the nature of the filament bias used in the BeePre.
I do not expect this to be an actual problem - most tubes have enough excess emission to handle +/-10% filament voltage variation.
The theoretical risk is that, as emission falls near the end of the tube's life, the reduced space charge is less able to repel massive high-velocity ions that lead to cathode poisoning. However, the velocity of any such ions is greatly reduced by the low plate voltage in the BeePre - so I doubt it is a problem in real life. It's even possible that the reduced filament temperature will extend the life.