I'm was going to cautiously call this solved. I checked all the spots mentioned above. Clearence at 6U & 7U as well as 9U and 10U is greater than it appears in the picture, and seems to be in spec. The pic is a bad angle for sure - sorry about that. I heated or added solder to all the headphone jack connections, as well as 3U and 7L and 9L just to be safe. However, I noticed the problem still occured, and I had the multimeter attached at 12U to check the voltage at 10. Voltage there is now 0 as it should be. So the voltage problem is solved. However, when I removed the black alligator clip, the LED immediately went out. I started tapping around 12 and 13 and found a lose connection at 13. Just to be safe I heated up 12 as well. Turned the amp back on and it ran for several minutes with no issues. Just enough to give me hope. Then the LED started flashing off again. When it does, I get a bunch of terrible static through the headphones so it's very easy to detect. Don't worry - using an old, cheap pair of iem's, so no worries about damage. I started tapping around again, and each tap brought the LED back on no matter where on the chassis I tapped until it eventually clicked off for good after ten or so seconds. No tapping of any kind, anywhere revived it.
I let the amp cool down and plugged it back in. It worked again as normal for about 3.5 minutes, then I got the static again. This time, I think I have tracked it down to one of the following: B5, B2, or B3, with most of my suspicion on B5 and B2. Pressure in between these seems to eleviate the problem, so I need to check these solders.
It's getting late and I have to leave on a business trip early in the morning. Probably have to let this drop till I get back on Sunday. I'll definitely post and update and some new pics Sunday evening. Again, I really appreciate your help. Definitely making progress - hopefully close to solving it! Sorry my soldering skills are so poor.