I am a little confused by the multiple boards and amps, but it's probably not worth the effort to figure out exactly what the sequence was. As I said we have seen cascading failures. In addition we've seen cases where a semiconductor is damaged but not completely blown - simple resistance checks aren't always enough to detect a part that will not work at circuit voltages.
The bottom line is, if one of these boards has blown, you should replace ALL of the zeners as well as the board with ALL new parts. A damaged board can blow the zeners, and a damaged zener can blow the board.
The power supply is probably fine, since the B side LEDs glow properly.
When you replace the board and zeners, and check the B6 resistance (should be high), do this check as well: measure the resistance to ground of both ends of the two 174K resistors. You should find one point with 350K ohms, two points at 175K, and one point at 2.5K. The bias current for the A side LEDs goes through these resistors, so this is to ensure that they should light.
We have lately found that a good test is to connect the voltmeter to B6 and monitor it at startup - standing by to pull the plug quickly if necessary. It should show around 380v initially as the zeners clamp the voltage; in some 10-20 seconds it should drop to 350v as the regulator tube kicks in. If it rises above 385 initially, pull the plug IMMEDIATELY - either the zeners are not clamping the voltage, or the MJE350 is blown and driving too much current through the zeners. If the initial voltage is less than 350v then at least one of the zeners has shorted itself.
(By the way, these voltages apply to the Paramount 1.1; the soft-start upgrade and the Paramount 1.1 are different.)
I am sorry you're having such a frustrating time with this. But we'll get it working, one way or another!