Not sure if this is your problem or not, but often when the LEDs are not all glowing, it can mean that you got some of the small transistors in the wrong places -- there are two types and they are not interchangeable between the driver and output tube circuit boards. So, first thing would be to go and make sure the correct transistors are in the right places and that all the oorientations are corrrect.
DDon't worry, you'll get it all figured out and then you'll be very glad you did.
HTH,
Jim
Jim Rebman -- recovering audiophile
Equitech balanced power; uRendu, USB processor -> Musette DAC -> 5670 tube buffer -> Finale Audio F138 FFX -> Cain and Cain Abbys near-field).
s.e.x. 2.1 under construction. Want list: Stereomour II
All ICs homemade (speaker and power next)