At first look, you are not that bad off with the stock build. Your speakers are pretty inefficient, so you will probably use all 35 watts on musical peaks. You should be able to get that with a volume setting four clicks below maximum, using the stock 33K resistors.
The other sources have their own level controls, and you can set them to match the CD player.
If you find this is too loud, you can change the resistor on the CD player inputs. The supplied resistors come in 6dB increments, and the Whispers are 3dB per step except for the lowest few, so it should be easy to decide which resistor to use. I base my levels on statistical averages for musical genre, personal preference, room acoustics, etc. so it's not unusual for your situation to differ by as much as 6dB either way.